High Protein Pepperoni Pizza Squash Boats (Low-Carb & Comforting)

Engaging Introduction

Comfort food has a way of bringing people together, and pizza is one of those universally loved dishes that transcends borders and cultures. But when you’re trying to eat lighter, boost your protein intake, or cut back on refined carbs, traditional pizza can feel like an indulgence reserved for special occasions. That’s exactly why these High-Protein Pepperoni Pizza Squash Boats deserve a spot in your weekly rotation.

This recipe captures everything we love about pizza—savory sauce, melty cheese, and bold pepperoni flavor—without the heavy crust. Roasted squash becomes a naturally sweet, tender base that holds a hearty, protein-packed filling. The result is a satisfying, cozy meal that feels indulgent but fits beautifully into a balanced, low-carb lifestyle. Whether you’re cooking for family, prepping meals ahead of time, or simply craving pizza night without the guilt, these squash boats deliver on all fronts.

Why You’ll Love This Recipe

High in protein: Each serving delivers an impressive protein boost, keeping you full and energized.

Low-carb comfort food: All the pizza vibes, none of the heavy dough.

Family-friendly: Familiar flavors make this an easy win for kids and adults alike.

Great for meal prep: Reheats well and stays flavorful for days.

Customizable: Easy to swap proteins, cheeses, or toppings based on preference.

Ingredients (with Notes)

Base

Spaghetti squash or butternut squash: Both work beautifully. Spaghetti squash offers a lighter texture, while butternut squash is slightly sweeter and creamier.

Olive oil: Helps the squash roast evenly and enhances flavor.

Salt & black pepper: Essential for bringing out the natural sweetness of the squash.

High-Protein Pizza Filling

Lean ground beef or ground turkey (93–99% lean): Keeps the dish high in protein and lower in fat.

Low-sugar marinara or pizza sauce: Reduces added sugars while maintaining bold tomato flavor.

Italian seasoning: Adds classic pizza aroma and depth.

Garlic powder: Boosts savory flavor without overpowering.

Crushed red pepper (optional): For a subtle heat kick.

Toppings

Shredded mozzarella or part-skim mozzarella: Melts beautifully and keeps calories in check.

Turkey pepperoni (or regular): A lighter option that still delivers classic pepperoni taste.
Grated Parmesan (optional): Adds a salty, nutty finish.

Step-by-Step Guide

1️⃣ Roast the Squash

Preheat your oven to 400°F (200°C). Brush the squash halves with olive oil and season with salt and black pepper. Place them cut-side down on a baking sheet and roast for 30–35 minutes, or until fork-tender. This step creates a soft, flavorful base for your pizza filling.

2️⃣ Cook the Protein Filling

While the squash roasts, heat a skillet over medium heat. Add the ground beef or turkey and cook until fully browned. Drain excess fat if needed. Stir in the marinara sauce, Italian seasoning, garlic powder, and crushed red pepper flakes. Simmer for 2–3 minutes until thick, rich, and aromatic.

3️⃣ Assemble the Pizza Boats

Flip the roasted squash cut-side up. If desired, scoop out a small portion from the center to create more space. Fill each squash half generously with the meat mixture. Top with shredded mozzarella, arrange the pepperoni slices on top, and finish with Parmesan if using.

4️⃣ Bake Until Melty

Return the assembled squash boats to the oven and bake for 8–10 minutes, or until the cheese is melted and bubbly. For an extra golden finish, broil for 1–2 minutes while keeping a close eye to prevent burning.

Pro-Tips for Perfect Pizza Squash Boats

Choose evenly sized squash so they cook at the same rate.

Don’t over-scoop: Leaving some flesh ensures structure and flavor.

Boost protein even more by mixing a little cottage cheese into the filling.

Crispier pepperoni: Add pepperoni halfway through the final bake.

Make it keto-friendly: Use spaghetti squash and ultra-low-carb marinara.

Nutritional Benefits

These High-Protein Pepperoni Pizza Squash Boats are a smart alternative to traditional pizza. Lean protein supports muscle maintenance and keeps you feeling full longer, while squash provides fiber, vitamins A and C, and antioxidants. Using the oven instead of frying keeps added fats minimal, and choosing low-sugar sauce helps control blood sugar spikes. With approximately 35–45 grams of protein per serving, this dish is ideal for active lifestyles, weight management, and balanced eating.

Storage Instructions

Refrigeration: Store leftovers in an airtight container for up to 4 days.

Reheating: Warm in the oven at 350°F (175°C) for 10–12 minutes or in the air fryer for best texture.

Freezing: Freeze fully cooked squash boats for up to 2 months. Thaw overnight before reheating.

These High-Protein Pepperoni Pizza Squash Boats prove that comfort food can be both nourishing and satisfying. Paired with a fresh salad or enjoyed on their own, they’re a delicious way to enjoy pizza night—smartly.
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